<> Cite this article. OsCYP71 contains the N-terminal WD40 repeats and shows high orthology (81% identity) with AtCYP71 (Additional file 1). The novelty of these genes and the suggestion that these three genes originated from the regional duplications of rice chromosome 1 has recently been reported [8]. For example, FKBP12-/- mice suffer early embryonic death due to cardiac defects, and the disruption of genes that encode for the nuclear-localized FKBP42 and FKBP70 leads to multiple morphogenetic defects in Arabidopsis thaliana [12, 13]. Reactions were incubated at 65°C for 5 min, 50°C for 50 min, and then 85°C for 5 min. In addition, these three proteins have almost the same 14 key residues for PPIase activity and are conserved in 12 out of 14 key residues of hFKBP12 for PPIase activity, suggesting that they are catalytically active isoforms (Table 1). Ten OsFKBPs (OsFKBP13, -16-1, -16-2, -16-3, -16-4, -17-1, -17-2, -18, -19, and -20-2) contain putative chloroplast-targeting sequences in the N-terminal region. Rice, edible starchy cereal grain and the plant by which it is produced. Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 305-506, Korea, Young Nim You, Min Sook Seok, Jeong Mee Park & Hye Sun Cho, Genome Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon, 305-306, Korea, Department of Biological Science, Seonam University, Namwon, 590-711, Korea, Bio-crops Development Division, National Academy of Agricultural Science, RDA, Suwon, Korea, Department of Plant and Microbial Biology, University of California, Berkeley, California, 94720, USA, You can also search for this author in Orthologs of these three FKBPs are unlikely to be in Arabidopsis, although they have weak identity with AtFKBP65 in their amino acid sequences (Additional file 1).

10.1016/S1360-1385(01)02044-1. We consider three rice plant diseases namely Bacterial leaf blight, Brown spot, and Leaf smut. Google Scholar Cheng KS, Wang XK, Zhou JW, Lu YX, Lou J, Huang HW (1984) Studies on indigenous rices in Yunnan and their utilization. Yang X, Tuskan GA, Cheng MZ: Divergence of the Dof gene families in poplar, Arabidopsis, and rice suggests multiple modes of gene evolution after duplication. Plant Physiol. Moreover, the diversity of IMM proteins was somewhat different for the monocot rice than for the dicot Arabidopsis. Serrano Pepper. Edvardsson A, Shapiquzov A, Petersson UA, Schröder WP, Vener AV: Immunophilin AtFKBP13 sustains all peptidyl-proryl isomerase activity in the thylakoid lumen from Arabidopsis thaliana deficient in AtCYP20-2. Thus, AtFKBP17-2 and 17-3, seen as gene duplicates based on their high sequence similarity, have been duplicate since the divergence of the evolutionary lineage between rice and Arabidopsis.
Jun Cheul Ahn 3, Dae-Won Kim 2, Young Nim You 1, Min Sook Seok 1, Jeong Mee Park 1, Hyunsik Hwang 4, Beom-Gi Kim 4, Sheng Luan 5, Hong-Seog Park 2 & Hye Sun Cho 1 BMC Plant Biology volume 10, Article number: 253 (2010) Cite this article. %���� However, as stated above, all four OsFKBPs of clade III have the closest similarity to AtFKBP53 and FKB53 as a probable ancestral protein. 1991, 252: 836-839. 2004, 134: 1244-1247. Reimer U, Fischer G: Local structural changes caused by peptidyl-prolyl cis/trans isomerization in the native state of proteins. Expression level of representative immunophilins under salt stress. In particular, OsCYP59b expression increased only 24 h after treatment (Figure 7B). Early Elberta Peach. 11, no. Backgrounds indicate percentage of amino acid similarity: black, 95%; dark grey, 70%; light grey, 40%. 1995, 14: 4939-4948. Though attached to the mother plant in its earlier stage, it becomes independent later on since it has its own roots. 2005, 272: 3461-3476. The OsCYP59b gene was transiently upregulated only 24 h after both stress treatments; however, OsCYP59a (maybe a duplicate of OsCYP59b) expression was unchanged by salt/desiccation stress. Romano PG, Horton P, Gray JE: The Arabidopsis cyclophilin gene family. Cytosolic AtCYP18-1, -18-2, -18-3, -18-4, -19-1, -19-2, and -19-3 are highly conserved and probably have similar functions [4]. 1999, 119: 693-704. Putative cytosolic OsCYP18-4, -19-2, and -19-3; secretional OsCYP19-4 and OsCYP21-1; mitochondria-targeting OsCYP20-1 and OsCYP22; and chloroplast-targeting OsCYP20-2 and OsCYP20-3 are closely related, with similar amino acid sequences, and mostly belong to 2 branches of clade I (Figure 6). Rice Plant genus and other classification is necessary information to know for every botanist.